Restriction enzyme digest of DNA
with commercially available restriction enzymes
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Reverse
Complement
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Minimum recognition size for each restriction enzyme
1
2
3
4
5
6
7
8
Type of restriction enzyme
All
Blunt ends
Overhang end
Use only this endonuclease
Select
AanI
AarI
AasI
AatII
AbaSI
AbsI
AccI
AccII
AccIII
Acc16I
Acc36I
Acc65I
AccB1I
AccB7I
AccBSI
AciI
AclI
AclWI
AcoI
AcsI
AcuI
AcvI
AcyI
AdeI
AfaI
AfeI
AfiI
AflII
AflIII
AgeI
AgsI
AhdI
AhlI
AjiI
AjnI
AjuI
AleI
AlfI
AloI
AluI
AluBI
AlwI
Alw21I
Alw26I
Alw44I
AlwNI
Ama87I
Aor13HI
Aor51HI
ApaI
ApaLI
ApeKI
ApoI
ArsI
AscI
AseI
AsiGI
AsiSI
Asp700I
Asp718I
AspA2I
AspLEI
AspS9I
AssI
AsuII
AsuC2I
AsuHPI
AsuNHI
AvaI
AvaII
AvrII
AxyI
BaeI
BaeGI
BalI
BamHI
BanI
BanII
BarI
BasI
BauI
BbrPI
BbsI
BbvI
Bbv12I
BbvCI
BccI
BceAI
BcgI
BciT130I
BciVI
BclI
BcnI
BcoDI
BcuI
BfaI
BfmI
BfoI
BfrI
BfuI
BfuAI
BfuCI
BglI
BglII
BisI
BlnI
BlpI
BlsI
BmcAI
Bme18I
Bme1390I
BmeRI
BmeT110I
BmgBI
BmgT120I
BmiI
BmrI
BmrFI
BmsI
BmtI
BmuI
BoxI
BpiI
BplI
BpmI
Bpu10I
Bpu14I
Bpu1102I
BpuEI
BpuMI
BpvUI
BsaI
Bsa29I
BsaAI
BsaBI
BsaHI
BsaJI
BsaWI
BsaXI
Bsc4I
Bse1I
Bse8I
Bse21I
Bse118I
BseAI
BseBI
BseCI
BseDI
Bse3DI
BseGI
BseJI
BseLI
BseMI
BseMII
BseNI
BsePI
BseRI
BseSI
BseXI
BseX3I
BseYI
BsgI
Bsh1236I
Bsh1285I
BshFI
BshNI
BshTI
BshVI
BsiEI
BsiHKAI
BsiHKCI
BsiSI
BsiWI
BslI
BslFI
BsmI
BsmAI
BsmBI
BsmFI
BsnI
Bso31I
BsoBI
Bsp13I
Bsp19I
Bsp68I
Bsp119I
Bsp120I
Bsp143I
Bsp1286I
Bsp1407I
Bsp1720I
BspACI
BspCNI
BspDI
BspEI
BspFNI
BspHI
BspLI
BspMI
BspOI
BspPI
BspQI
BspTI
BspT104I
BspT107I
BsrI
BsrBI
BsrDI
BsrFI
BsrGI
BsrSI
BssAI
BssECI
BssHII
BssKI
BssMI
BssNI
BssNAI
BssSI
BssT1I
Bst6I
Bst1107I
BstACI
BstAFI
BstAPI
BstAUI
BstBI
Bst2BI
BstBAI
Bst4CI
BstC8I
BstDEI
BstDSI
BstEII
BstENI
BstF5I
BstFNI
BstH2I
BstHHI
BstKTI
BstMAI
BstMBI
BstMCI
BstMWI
BstNI
BstNSI
BstOI
BstPI
BstPAI
BstSCI
BstSFI
BstSLI
BstSNI
BstUI
Bst2UI
BstV1I
BstV2I
BstXI
BstX2I
BstYI
BstZI
BstZ17I
BsuI
Bsu15I
Bsu36I
BsuRI
BtgI
BtgZI
BtrI
BtsI
BtsIMutI
BtsCI
BtuMI
BveI
Cac8I
CaiI
CciI
CciNI
CfoI
Cfr9I
Cfr10I
Cfr13I
Cfr42I
ClaI
CpoI
CseI
CsiI
CspI
Csp6I
CspAI
CspCI
CviAII
CviJI
CviKI-1
CviQI
DdeI
DinI
DpnI
DpnII
DraI
DraIII
DrdI
DriI
DseDI
EaeI
EagI
Eam1104I
Eam1105I
EarI
EciI
Ecl136II
EclXI
Eco24I
Eco31I
Eco32I
Eco47I
Eco47III
Eco52I
Eco57I
Eco72I
Eco81I
Eco88I
Eco91I
Eco105I
Eco130I
Eco147I
EcoICRI
EcoNI
EcoO65I
EcoO109I
EcoP15I
EcoRI
EcoRII
EcoRV
EcoT14I
EcoT22I
EcoT38I
Eco53kI
EgeI
EheI
ErhI
Esp3I
FaeI
FaiI
FalI
FaqI
FatI
FauI
FauNDI
FbaI
FblI
Fnu4HI
FokI
FriOI
FseI
FspI
FspAI
FspBI
FspEI
Fsp4HI
GlaI
GluI
GsaI
GsuI
HaeII
HaeIII
HapII
HgaI
HhaI
Hin1I
Hin1II
Hin6I
HinP1I
HincII
HindII
HindIII
HinfI
HpaI
HpaII
HphI
Hpy8I
Hpy99I
Hpy166II
Hpy188I
Hpy188III
HpyAV
HpyCH4III
HpyCH4IV
HpyCH4V
HpyF3I
HpyF10VI
HpySE526I
Hsp92I
Hsp92II
HspAI
KasI
KflI
KpnI
Kpn2I
KroI
KspI
Ksp22I
KspAI
Kzo9I
LguI
LpnPI
Lsp1109I
LweI
MabI
MaeI
MaeII
MaeIII
MalI
MauBI
MbiI
MboI
MboII
MfeI
MflI
MhlI
MlsI
MluI
MluCI
MluNI
MlyI
Mly113I
MmeI
MnlI
Mph1103I
MreI
MroI
MroNI
MroXI
MscI
MseI
MslI
MspI
Msp20I
MspA1I
MspCI
MspJI
MspR9I
MssI
MunI
MvaI
Mva1269I
MvnI
MvrI
MwoI
NaeI
NarI
NciI
NcoI
NdeI
NdeII
NgoMIV
NheI
NlaIII
NlaIV
NmeAIII
NmuCI
NotI
NruI
NsbI
NsiI
NspI
NspV
OliI
PacI
PaeI
PaeR7I
PagI
PalAI
PasI
PauI
PceI
PciI
PciSI
PcsI
PctI
PdiI
PdmI
PfeI
Pfl23II
PflFI
PflMI
PfoI
PinAI
PleI
Ple19I
PluTI
PmaCI
PmeI
PmlI
PpsI
Ppu21I
PpuMI
PscI
PshAI
PshBI
PsiI
Psp5II
Psp6I
Psp1406I
Psp124BI
PspCI
PspEI
PspGI
PspLI
PspN4I
PspOMI
PspPI
PspPPI
PspXI
PsrI
PstI
PstNI
PsuI
PsyI
PteI
PvuI
PvuII
RgaI
RigI
RruI
RsaI
RsaNI
RseI
RsrII
Rsr2I
SacI
SacII
SalI
SapI
SaqAI
SatI
Sau96I
Sau3AI
SbfI
ScaI
SchI
ScrFI
SdaI
SduI
SetI
SexAI
SfaAI
SfaNI
SfcI
SfiI
SfoI
Sfr274I
Sfr303I
SfuI
SgeI
SgfI
SgrAI
SgrBI
SgrDI
SgsI
SlaI
SmaI
SmiI
SmiMI
SmlI
SmoI
SnaBI
SpeI
SphI
Sse9I
Sse8387I
SseBI
SsiI
SspI
SspDI
SstI
StrI
StuI
StyI
StyD4I
SwaI
TaaI
TaiI
TaqI
TaqII
TasI
TatI
TauI
TfiI
Tru1I
Tru9I
TscAI
TseI
TseFI
Tsp45I
TspDTI
TspGWI
TspMI
TspRI
Tth111I
Van91I
Vha464I
VneI
VpaK11BI
VspI
XagI
XapI
XbaI
XceI
XcmI
XhoI
XhoII
XmaI
XmaJI
XmiI
XmnI
XspI
ZraI
ZrmI
Zsp2I
Commercial source
Only restriction enzymes with known bases (no N,R,Y...)
Include Type IIb restriction enzymes (Two cleaves per recognition sequence)
Include Type IIs restriction enzymes (Non-palindromic and cleavage outside of the recognition site)
When two or more input sequences are searched:
Show only endonucleases showing different restriction patterns for searched sequences.
Version:
1.20160522
, based in
REBASE version 605
This service recognizes 269 different cleavage patterns (from all 620 commercially available endonucleases).
This tool was described by San Millán
et al
, 2013 (DOI:
10.1186/1756-0500-6-513
).
Copy and paste PHP script is freely available at
biophp.org
Restriction Home.